STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620725_03795Unannotated protein. (529 aa)    
Predicted Functional Partners:
GCA_000620725_03796
Unannotated protein.
 
     0.819
GCA_000620725_03794
Unannotated protein.
 
     0.673
GCA_000620725_04153
Unannotated protein.
  
     0.670
GCA_000620725_04778
Unannotated protein.
 
     0.627
GCA_000620725_03793
Unannotated protein.
 
     0.590
GCA_000620725_03781
Unannotated protein.
  
     0.556
GCA_000620725_02413
Unannotated protein.
  
  
  0.554
GCA_000620725_03401
Unannotated protein.
  
     0.526
GCA_000620725_04078
Unannotated protein.
  
  
  0.520
GCA_000620725_01844
Unannotated protein.
  
     0.510
Your Current Organism:
Acidobacteriaceae bacterium URHE0068
NCBI taxonomy Id: 1380348
Other names: A. bacterium URHE0068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.