STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000688075_01301Unannotated protein. (310 aa)    
Predicted Functional Partners:
GCA_000688075_01302
Unannotated protein.
 
     0.862
GCA_000688075_00657
Unannotated protein.
     
 0.790
GCA_000688075_02153
Unannotated protein.
     
 0.790
GCA_000688075_04650
Unannotated protein.
     
 0.790
GCA_000688075_03012
Unannotated protein.
   
 
  0.707
GCA_000688075_03347
Unannotated protein.
    
 0.589
GCA_000688075_00023
Unannotated protein.
    
  0.585
GCA_000688075_03390
Unannotated protein.
    
  0.582
GCA_000688075_01300
Unannotated protein.
       0.506
GCA_000688075_03889
Unannotated protein.
  
  
  0.482
Your Current Organism:
Mesorhizobium sp. URHC0008
NCBI taxonomy Id: 1380350
Other names: M. sp. URHC0008
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.