STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000688075_04188Unannotated protein. (150 aa)    
Predicted Functional Partners:
GCA_000688075_03077
Unannotated protein.
  
  
 0.941
GCA_000688075_03012
Unannotated protein.
    
  0.851
GCA_000688075_04187
Unannotated protein.
    
  0.831
GCA_000688075_02432
Unannotated protein.
  
 
  0.791
GCA_000688075_05764
Unannotated protein.
    
 0.754
GCA_000688075_04620
Unannotated protein.
  
  
  0.745
GCA_000688075_03458
Unannotated protein.
   
    0.731
GCA_000688075_04167
Unannotated protein.
  
 
  0.721
GCA_000688075_00335
Unannotated protein.
    
  0.701
GCA_000688075_00339
Unannotated protein.
    
  0.700
Your Current Organism:
Mesorhizobium sp. URHC0008
NCBI taxonomy Id: 1380350
Other names: M. sp. URHC0008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.