STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620185_04068Unannotated protein. (397 aa)    
Predicted Functional Partners:
GCA_000620185_04069
Unannotated protein.
 
  
 0.990
GCA_000620185_04070
Unannotated protein.
 
  
 0.965
GCA_000620185_03756
Unannotated protein.
   
  0.898
GCA_000620185_03031
Unannotated protein.
  
 
  0.890
GCA_000620185_03032
Unannotated protein.
  
 
  0.885
GCA_000620185_03030
Unannotated protein.
    
  0.884
GCA_000620185_04708
Unannotated protein.
  
 
  0.748
GCA_000620185_04709
Unannotated protein.
  
 
  0.737
GCA_000620185_01507
Unannotated protein.
  
 
  0.516
GCA_000620185_02775
Unannotated protein.
  
 
  0.516
Your Current Organism:
Geodermatophilaceae bacterium URHB0062
NCBI taxonomy Id: 1380353
Other names: G. bacterium URHB0062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.