STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO44185.1Alkyl sulfatase BDS1, metallo-beta-lactamase superfamily. (652 aa)    
Predicted Functional Partners:
SEP32955.1
Uncharacterized conserved protein.
 
     0.637
SEO44217.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
   
 0.586
SEO65580.1
Arylsulfatase.
 
   
 0.531
SEO44155.1
Branched-chain amino acid transport system substrate-binding protein.
       0.419
Your Current Organism:
Rhodospirillales bacterium URHD0017
NCBI taxonomy Id: 1380357
Other names: R. bacterium URHD0017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.