STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP22904.1Tripartite-type tricarboxylate transporter, receptor component TctC. (322 aa)    
Predicted Functional Partners:
SEP49874.1
Tripartite tricarboxylate transporter TctA family protein.
  
 
  0.861
SEP30961.1
Tripartite tricarboxylate transporter TctA family protein.
  
 
  0.860
SEP50837.1
Tripartite tricarboxylate transporter TctA family protein.
  
 
  0.857
SEP41254.1
TctA family transporter.
  
 
  0.817
SEO44807.1
Tripartite tricarboxylate transporter TctB family protein.
 
 
  0.621
SEP22888.1
benzoyl-CoA 2,3-dioxygenase component B.
       0.608
SEP22897.1
5-hydroxyisourate hydrolase.
       0.608
SEN75949.1
Tripartite tricarboxylate transporter TctA family protein.
  
 
  0.604
SEP22879.1
2,3-dihydro-2,3-dihydroxybenzoyl-CoA ring cleavage enzyme.
       0.592
SEN75982.1
Tripartite tricarboxylate transporter TctB family protein.
   
 
  0.475
Your Current Organism:
Rhodospirillales bacterium URHD0017
NCBI taxonomy Id: 1380357
Other names: R. bacterium URHD0017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.