STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620545_00198Unannotated protein. (219 aa)    
Predicted Functional Partners:
GCA_000620545_03898
Unannotated protein.
     0.739
GCA_000620545_00197
Unannotated protein.
       0.701
GCA_000620545_00196
Unannotated protein.
       0.620
GCA_000620545_02281
Unannotated protein.
   
 
 0.579
GCA_000620545_04118
Unannotated protein.
     
 0.558
GCA_000620545_03217
Unannotated protein.
    
  0.554
GCA_000620545_01545
Unannotated protein.
    
  0.522
GCA_000620545_00195
Unannotated protein.
       0.518
GCA_000620545_00194
Unannotated protein.
       0.505
GCA_000620545_00793
Unannotated protein.
 
     0.433
Your Current Organism:
Intrasporangiaceae bacterium URHB0013
NCBI taxonomy Id: 1380370
Other names: I. bacterium URHB0013
Server load: low (30%) [HD]