STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620545_03083Unannotated protein. (115 aa)    
Predicted Functional Partners:
GCA_000620545_02787
Unannotated protein.
  
     0.614
GCA_000620545_03957
Unannotated protein.
  
     0.590
GCA_000620545_04108
Unannotated protein.
  
     0.586
GCA_000620545_03080
Unannotated protein.
       0.509
GCA_000620545_03081
Unannotated protein.
       0.509
GCA_000620545_03082
Unannotated protein.
       0.509
GCA_000620545_02195
Unannotated protein.
  
   
 0.499
GCA_000620545_02879
Unannotated protein.
  
     0.463
GCA_000620545_02282
Unannotated protein.
  
   
 0.452
GCA_000620545_02887
Unannotated protein.
  
     0.443
Your Current Organism:
Intrasporangiaceae bacterium URHB0013
NCBI taxonomy Id: 1380370
Other names: I. bacterium URHB0013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.