STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620545_03869Unannotated protein. (499 aa)    
Predicted Functional Partners:
GCA_000620545_03871
Unannotated protein.
 
     0.910
GCA_000620545_03870
Unannotated protein.
 
   0.840
GCA_000620545_02954
Unannotated protein.
   
 
  0.796
GCA_000620545_00027
Unannotated protein.
   
  0.767
GCA_000620545_00156
Unannotated protein.
   
  0.767
GCA_000620545_00333
Unannotated protein.
   
  0.767
GCA_000620545_01082
Unannotated protein.
   
  0.767
GCA_000620545_01656
Unannotated protein.
   
  0.767
GCA_000620545_01773
Unannotated protein.
   
  0.767
GCA_000620545_01861
Unannotated protein.
   
  0.767
Your Current Organism:
Intrasporangiaceae bacterium URHB0013
NCBI taxonomy Id: 1380370
Other names: I. bacterium URHB0013
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.