STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620545_03967Unannotated protein. (154 aa)    
Predicted Functional Partners:
GCA_000620545_01582
Unannotated protein.
  
 0.999
GCA_000620545_03966
Unannotated protein.
  
 0.999
GCA_000620545_01661
Unannotated protein.
  
 
 0.983
GCA_000620545_03008
Unannotated protein.
   
  0.963
GCA_000620545_03009
Unannotated protein.
   
  0.963
GCA_000620545_03010
Unannotated protein.
   
  0.958
GCA_000620545_03932
Unannotated protein.
  
 0.823
GCA_000620545_03201
Unannotated protein.
  
 
 0.819
GCA_000620545_01479
Unannotated protein.
  
 
 0.801
GCA_000620545_03090
Unannotated protein.
   
 0.783
Your Current Organism:
Intrasporangiaceae bacterium URHB0013
NCBI taxonomy Id: 1380370
Other names: I. bacterium URHB0013
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.