STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620605_01263Unannotated protein. (197 aa)    
Predicted Functional Partners:
GCA_000620605_01264
Unannotated protein.
  
 
 0.884
GCA_000620605_01962
Unannotated protein.
    
 0.816
GCA_000620605_02052
Unannotated protein.
  
  
 0.686
GCA_000620605_01265
Unannotated protein.
       0.603
GCA_000620605_01262
Unannotated protein.
       0.597
GCA_000620605_02061
Unannotated protein.
   
 
 0.579
GCA_000620605_00348
Unannotated protein.
 
 
   0.520
GCA_000620605_00921
Unannotated protein.
     
 0.516
GCA_000620605_02353
Unannotated protein.
  
    0.494
GCA_000620605_01022
Unannotated protein.
  
 
 0.476
Your Current Organism:
Ahrensia sp. 13GOM1096m
NCBI taxonomy Id: 1380380
Other names: A. sp. 13_GOM-1096m, Ahrensia sp. 13_GOM-1096m
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.