STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518405_01350Unannotated protein. (193 aa)    
Predicted Functional Partners:
GCA_000518405_00816
Unannotated protein.
  
 0.984
GCA_000518405_02681
Unannotated protein.
 
  
 0.965
GCA_000518405_01409
Unannotated protein.
 
     0.770
GCA_000518405_01349
Unannotated protein.
       0.618
GCA_000518405_01253
Unannotated protein.
  
  
 0.593
GCA_000518405_01429
Unannotated protein.
    
 0.565
GCA_000518405_01344
Unannotated protein.
  
 
 0.564
GCA_000518405_02537
Unannotated protein.
  
 
 0.556
GCA_000518405_02630
Unannotated protein.
      0.503
GCA_000518405_01919
Unannotated protein.
  
 
 0.482
Your Current Organism:
Tenacibaculum sp. 47AGOM205m
NCBI taxonomy Id: 1380384
Other names: T. sp. 47A_GOM-205m, Tenacibaculum sp. 47A_GOM-205m
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.