STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518405_01940Unannotated protein. (346 aa)    
Predicted Functional Partners:
GCA_000518405_01941
Unannotated protein.
 
 
 0.998
GCA_000518405_00719
Unannotated protein.
 
 
 0.986
GCA_000518405_01944
Unannotated protein.
 
  
 
0.977
GCA_000518405_01942
Unannotated protein.
 
0.966
GCA_000518405_00960
Unannotated protein.
  
  
 0.947
GCA_000518405_01617
Unannotated protein.
 
   
 0.810
GCA_000518405_00350
Unannotated protein.
 
   
 0.765
GCA_000518405_01943
Unannotated protein.
  
    0.742
GCA_000518405_01929
Unannotated protein.
 
  
 0.722
GCA_000518405_01939
Unannotated protein.
       0.697
Your Current Organism:
Tenacibaculum sp. 47AGOM205m
NCBI taxonomy Id: 1380384
Other names: T. sp. 47A_GOM-205m, Tenacibaculum sp. 47A_GOM-205m
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.