STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620625_01615Unannotated protein. (64 aa)    
Predicted Functional Partners:
GCA_000620625_05950
Unannotated protein.
   
 0.992
GCA_000620625_04931
Unannotated protein.
   
 0.894
GCA_000620625_06400
Unannotated protein.
   
 0.886
GCA_000620625_06955
Unannotated protein.
   
 0.886
GCA_000620625_00890
Unannotated protein.
  
 0.884
GCA_000620625_01138
Unannotated protein.
     
 0.867
GCA_000620625_06958
Unannotated protein.
    
  0.867
GCA_000620625_01726
Unannotated protein.
    
 0.861
GCA_000620625_00166
Unannotated protein.
  
 0.848
GCA_000620625_04295
Unannotated protein.
  
 0.848
Your Current Organism:
Mycobacterium sp. URHB0044
NCBI taxonomy Id: 1380386
Other names: M. sp. URHB0044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.