STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620625_04031Unannotated protein. (175 aa)    
Predicted Functional Partners:
GCA_000620625_04030
Unannotated protein.
 
 
 0.994
GCA_000620625_04029
Unannotated protein.
 
  
 0.982
GCA_000620625_02677
Unannotated protein.
 
  
 0.953
GCA_000620625_05961
Unannotated protein.
 
  0.897
GCA_000620625_02675
Unannotated protein.
 
  0.889
GCA_000620625_04032
Unannotated protein.
 
  
 0.826
GCA_000620625_00809
Unannotated protein.
 
 
  0.802
GCA_000620625_02676
Unannotated protein.
 
  
  0.794
GCA_000620625_05960
Unannotated protein.
  
  
 
0.791
GCA_000620625_01986
Unannotated protein.
 
 
  0.789
Your Current Organism:
Mycobacterium sp. URHB0044
NCBI taxonomy Id: 1380386
Other names: M. sp. URHB0044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.