STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620625_04738Unannotated protein. (487 aa)    
Predicted Functional Partners:
GCA_000620625_04295
Unannotated protein.
 0.909
GCA_000620625_00166
Unannotated protein.
 
 0.897
GCA_000620625_01855
Unannotated protein.
 0.858
GCA_000620625_05041
Unannotated protein.
 
 0.826
GCA_000620625_03326
Unannotated protein.
  
 
 0.809
GCA_000620625_00374
Unannotated protein.
 
0.797
GCA_000620625_04613
Unannotated protein.
    
  0.783
GCA_000620625_04739
Unannotated protein.
       0.773
GCA_000620625_02884
Unannotated protein.
   
 
 0.772
GCA_000620625_04617
Unannotated protein.
    
   0.710
Your Current Organism:
Mycobacterium sp. URHB0044
NCBI taxonomy Id: 1380386
Other names: M. sp. URHB0044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.