STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620625_05717Unannotated protein. (280 aa)    
Predicted Functional Partners:
GCA_000620625_05716
Unannotated protein.
 
 0.940
GCA_000620625_05713
Unannotated protein.
 
  
 0.939
GCA_000620625_05714
Unannotated protein.
 
 
 0.932
GCA_000620625_05715
Unannotated protein.
 
  
 0.927
GCA_000620625_05712
Unannotated protein.
  
  
 0.786
GCA_000620625_05711
Unannotated protein.
   
   0.761
GCA_000620625_05710
Unannotated protein.
 
  
 0.734
GCA_000620625_06773
Unannotated protein.
 
  
 
0.729
GCA_000620625_05709
Unannotated protein.
 
     0.706
GCA_000620625_05708
Unannotated protein.
  
    0.670
Your Current Organism:
Mycobacterium sp. URHB0044
NCBI taxonomy Id: 1380386
Other names: M. sp. URHB0044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.