STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620645_00152Unannotated protein. (148 aa)    
Predicted Functional Partners:
GCA_000620645_01319
Unannotated protein.
  
     0.621
GCA_000620645_04262
Unannotated protein.
  
     0.572
GCA_000620645_00151
Unannotated protein.
  
    0.569
GCA_000620645_02724
Unannotated protein.
  
     0.505
GCA_000620645_00613
Unannotated protein.
  
     0.487
GCA_000620645_02684
Unannotated protein.
  
     0.464
GCA_000620645_04299
Unannotated protein.
  
     0.458
GCA_000620645_02481
Unannotated protein.
  
     0.420
GCA_000620645_03157
Unannotated protein.
  
     0.419
GCA_000620645_03585
Unannotated protein.
  
     0.418
Your Current Organism:
Nocardioides sp. URHA0032
NCBI taxonomy Id: 1380388
Other names: N. sp. URHA0032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.