STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000688095_03669Unannotated protein. (407 aa)    
Predicted Functional Partners:
GCA_000688095_03670
Unannotated protein.
       0.618
GCA_000688095_02887
Unannotated protein.
  
 0.604
GCA_000688095_03262
Unannotated protein.
  
     0.575
GCA_000688095_00867
Unannotated protein.
  
    0.500
GCA_000688095_04630
Unannotated protein.
   
 
  0.493
GCA_000688095_05876
Unannotated protein.
  
     0.461
GCA_000688095_03671
Unannotated protein.
     
 0.453
GCA_000688095_01447
Unannotated protein.
  
     0.452
GCA_000688095_05875
Unannotated protein.
  
     0.434
GCA_000688095_01662
Unannotated protein.
  
     0.400
Your Current Organism:
Solirubrobacterales bacterium URHD0059
NCBI taxonomy Id: 1380390
Other names: S. bacterium URHD0059
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.