STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000688095_04977Unannotated protein. (225 aa)    
Predicted Functional Partners:
GCA_000688095_01432
Unannotated protein.
    
 
 0.993
GCA_000688095_00788
Unannotated protein.
  
 0.977
GCA_000688095_01498
Unannotated protein.
  
 
 0.936
GCA_000688095_02884
Unannotated protein.
 
 
 
 0.928
GCA_000688095_01938
Unannotated protein.
 
 
 
 0.927
GCA_000688095_01497
Unannotated protein.
  
 
 0.878
GCA_000688095_05828
Unannotated protein.
  
 
 0.870
GCA_000688095_05253
Unannotated protein.
 
 
 
 0.830
GCA_000688095_04742
Unannotated protein.
   
 
 0.794
GCA_000688095_04085
Unannotated protein.
  
 
 0.787
Your Current Organism:
Solirubrobacterales bacterium URHD0059
NCBI taxonomy Id: 1380390
Other names: S. bacterium URHD0059
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.