STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000688095_05041Unannotated protein. (390 aa)    
Predicted Functional Partners:
GCA_000688095_00505
Unannotated protein.
 0.925
GCA_000688095_00506
Unannotated protein.
 
 
 0.903
GCA_000688095_05042
Unannotated protein.
  
  0.820
GCA_000688095_01128
Unannotated protein.
  
 0.790
GCA_000688095_05043
Unannotated protein.
  
  0.790
GCA_000688095_02720
Unannotated protein.
  
 
 0.782
GCA_000688095_04691
Unannotated protein.
  
 0.779
GCA_000688095_01179
Unannotated protein.
  
     0.765
GCA_000688095_02668
Unannotated protein.
   
 0.747
GCA_000688095_02522
Unannotated protein.
   
  0.737
Your Current Organism:
Solirubrobacterales bacterium URHD0059
NCBI taxonomy Id: 1380390
Other names: S. bacterium URHD0059
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.