STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620685_00576Unannotated protein. (358 aa)    
Predicted Functional Partners:
GCA_000620685_00577
Unannotated protein.
 
     0.923
GCA_000620685_03710
Unannotated protein.
    
 0.716
GCA_000620685_02022
Unannotated protein.
 
 
   0.707
GCA_000620685_01471
Unannotated protein.
    
  0.699
GCA_000620685_04064
Unannotated protein.
 
  
 0.696
GCA_000620685_04280
Unannotated protein.
    
 0.642
GCA_000620685_03977
Unannotated protein.
   
   0.624
GCA_000620685_03690
Unannotated protein.
    
  0.603
GCA_000620685_01793
Unannotated protein.
  
     0.582
GCA_000620685_02400
Unannotated protein.
    
  0.551
Your Current Organism:
Dongia sp. URHE0060
NCBI taxonomy Id: 1380391
Other names: D. sp. URHE0060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.