STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620685_02133Unannotated protein. (454 aa)    
Predicted Functional Partners:
GCA_000620685_02134
Unannotated protein.
 0.999
GCA_000620685_05017
Unannotated protein.
 0.933
GCA_000620685_02132
Unannotated protein.
  
 
 0.926
GCA_000620685_00266
Unannotated protein.
   
 0.913
GCA_000620685_05680
Unannotated protein.
   
 0.913
GCA_000620685_03843
Unannotated protein.
 
 0.908
GCA_000620685_00453
Unannotated protein.
    
 0.897
GCA_000620685_01830
Unannotated protein.
 0.879
GCA_000620685_01109
Unannotated protein.
   
  0.874
GCA_000620685_01175
Unannotated protein.
 
 
 0.872
Your Current Organism:
Dongia sp. URHE0060
NCBI taxonomy Id: 1380391
Other names: D. sp. URHE0060
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.