STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620685_03849Unannotated protein. (158 aa)    
Predicted Functional Partners:
GCA_000620685_00242
Unannotated protein.
   
 
 0.717
GCA_000620685_05216
Unannotated protein.
  
  
  0.714
GCA_000620685_03340
Unannotated protein.
    
 0.695
GCA_000620685_02409
Unannotated protein.
  
 
 0.663
GCA_000620685_02967
Unannotated protein.
  
 
 0.663
GCA_000620685_04026
Unannotated protein.
  
 
 0.663
GCA_000620685_03465
Unannotated protein.
    
   0.640
GCA_000620685_00001
Unannotated protein.
   
 
  0.639
GCA_000620685_00443
Unannotated protein.
   
 
  0.639
GCA_000620685_00523
Unannotated protein.
   
 
  0.639
Your Current Organism:
Dongia sp. URHE0060
NCBI taxonomy Id: 1380391
Other names: D. sp. URHE0060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.