STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620685_03888Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_000620685_03889
Unannotated protein.
       0.795
GCA_000620685_03890
Unannotated protein.
       0.752
GCA_000620685_02229
Unannotated protein.
  
     0.704
GCA_000620685_02359
Unannotated protein.
 
      0.563
GCA_000620685_03891
Unannotated protein.
       0.521
GCA_000620685_04286
Unannotated protein.
 
      0.488
GCA_000620685_03497
Unannotated protein.
  
     0.452
GCA_000620685_00208
Unannotated protein.
  
     0.435
GCA_000620685_00209
Unannotated protein.
  
     0.430
GCA_000620685_01086
Unannotated protein.
  
 
  0.404
Your Current Organism:
Dongia sp. URHE0060
NCBI taxonomy Id: 1380391
Other names: D. sp. URHE0060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.