STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620685_04409Unannotated protein. (413 aa)    
Predicted Functional Partners:
GCA_000620685_04411
Unannotated protein.
  
 0.891
GCA_000620685_03298
Unannotated protein.
  
 0.847
GCA_000620685_05661
Unannotated protein.
  
 0.845
GCA_000620685_04609
Unannotated protein.
  
  
 0.757
GCA_000620685_04410
Unannotated protein.
       0.723
GCA_000620685_03300
Unannotated protein.
 
     0.671
GCA_000620685_00582
Unannotated protein.
  
  
 0.560
GCA_000620685_02253
Unannotated protein.
  
  
 0.560
GCA_000620685_05363
Unannotated protein.
  
  
 0.560
GCA_000620685_01336
Unannotated protein.
  
  
 0.444
Your Current Organism:
Dongia sp. URHE0060
NCBI taxonomy Id: 1380391
Other names: D. sp. URHE0060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.