STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620205_03040Unannotated protein. (171 aa)    
Predicted Functional Partners:
GCA_000620205_04142
Unannotated protein.
  
     0.763
GCA_000620205_03045
Unannotated protein.
 
     0.751
GCA_000620205_04704
Unannotated protein.
  
     0.718
GCA_000620205_03039
Unannotated protein.
       0.696
GCA_000620205_03042
Unannotated protein.
 
     0.694
GCA_000620205_03038
Unannotated protein.
       0.689
GCA_000620205_02815
Unannotated protein.
 
     0.676
GCA_000620205_04425
Unannotated protein.
  
     0.660
GCA_000620205_04099
Unannotated protein.
  
     0.654
GCA_000620205_03196
Unannotated protein.
  
     0.645
Your Current Organism:
Geodermatophilaceae bacterium URHA0031
NCBI taxonomy Id: 1380393
Other names: G. bacterium URHA0031
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.