STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518365_05848Unannotated protein. (68 aa)    
Predicted Functional Partners:
GCA_000518365_04425
Unannotated protein.
 
  
 0.942
GCA_000518365_01096
Unannotated protein.
  
  
 0.895
GCA_000518365_00212
Unannotated protein.
  
  
 0.681
GCA_000518365_04606
Unannotated protein.
  
    0.607
GCA_000518365_06196
Unannotated protein.
  
  
 0.588
GCA_000518365_00839
Unannotated protein.
  
    0.567
GCA_000518365_00867
Unannotated protein.
   
    0.560
GCA_000518365_06034
Unannotated protein.
   
    0.560
GCA_000518365_03226
Unannotated protein.
  
  
 0.557
GCA_000518365_01160
Unannotated protein.
   
    0.548
Your Current Organism:
Rhodospirillales bacterium URHD0088
NCBI taxonomy Id: 1380394
Other names: R. bacterium URHD0088
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.