STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518365_06302Unannotated protein. (131 aa)    
Predicted Functional Partners:
GCA_000518365_05060
Unannotated protein.
 
  
 0.992
GCA_000518365_01102
Unannotated protein.
   
    0.960
GCA_000518365_05738
Unannotated protein.
 
  
 0.929
GCA_000518365_05061
Unannotated protein.
  
  
 0.913
GCA_000518365_03760
Unannotated protein.
 
    0.886
GCA_000518365_02582
Unannotated protein.
   
  
 0.876
GCA_000518365_02065
Unannotated protein.
   
    0.872
GCA_000518365_02218
Unannotated protein.
   
    0.872
GCA_000518365_02580
Unannotated protein.
   
    0.872
GCA_000518365_05888
Unannotated protein.
   
    0.826
Your Current Organism:
Rhodospirillales bacterium URHD0088
NCBI taxonomy Id: 1380394
Other names: R. bacterium URHD0088
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.