STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPPC_16932O-methyltransferase. (250 aa)    
Predicted Functional Partners:
VFPPC_00322
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.679
VFPPC_10024
AAA domain-containing protein.
  
 
  0.588
VFPPC_14113
Uracil phosphoribosyl transferase.
  
 
  0.588
VFPPC_07121
Uridine kinase.
  
 
  0.588
VFPPC_04520
Uracil phosphoribosyltransferase.
  
 
  0.588
VFPPC_15647
Nicotinamide riboside kinase 1.
  
 
  0.588
VFPPC_03950
NADH-ubiquinone oxidoreductase.
  
 
  0.580
VFPPC_07465
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
     
 0.427
VFPPC_16041
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
     
 0.427
Your Current Organism:
Pochonia chlamydosporia 170
NCBI taxonomy Id: 1380566
Other names: Metacordyceps chlamydosporia 170, P. chlamydosporia 170
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