STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPPC_0456560S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (186 aa)    
Predicted Functional Partners:
VFPPC_10976
Fungal specific transcription factor domain-containing protein.
  
 0.999
VFPPC_14592
60s acidic ribosomal protein domain-containing protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
  0.999
VFPPC_09587
Ribosomal protein L22e.
   
 0.999
VFPPC_09567
60S ribosomal protein L10-A-like protein.
  
 0.999
VFPPC_14624
60S ribosomal protein L30.
   
 0.999
VFPPC_14150
Ribosomal protein L28e.
   
 0.999
VFPPC_16636
60S ribosomal protein L23.
  
 0.999
VFPPC_14498
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.999
VFPPC_14562
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.999
VFPPC_13865
60S ribosomal protein L33.
   
 0.999
Your Current Organism:
Pochonia chlamydosporia 170
NCBI taxonomy Id: 1380566
Other names: Metacordyceps chlamydosporia 170, P. chlamydosporia 170
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.