node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDS57277.1 | dnaE | SYMBAF_20129 | SYMBAF_90016 | Putative exonuclease VIII, ds DNA exonuclease encoded by prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | DNA polymerase III alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.961 |
CDS57277.1 | dnaN | SYMBAF_20129 | SYMBAF_140044 | Putative exonuclease VIII, ds DNA exonuclease encoded by prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.987 |
CDS57277.1 | dnaX | SYMBAF_20129 | SYMBAF_90210 | Putative exonuclease VIII, ds DNA exonuclease encoded by prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | DNA polymerase III/DNA elongation factor III, tau and gamma subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.950 |
CDS57277.1 | ftn | SYMBAF_20129 | SYMBAF_50224 | Putative exonuclease VIII, ds DNA exonuclease encoded by prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Ferritin iron storage protein (cytoplasmic); Iron-storage protein. | 0.771 |
CDS57277.1 | holB | SYMBAF_20129 | SYMBAF_50212 | Putative exonuclease VIII, ds DNA exonuclease encoded by prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | DNA polymerase III, delta prime subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.905 |
CDS57277.1 | holD | SYMBAF_20129 | SYMBAF_100176 | Putative exonuclease VIII, ds DNA exonuclease encoded by prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | 0.902 |
CDS57277.1 | holE | SYMBAF_20129 | SYMBAF_50223 | Putative exonuclease VIII, ds DNA exonuclease encoded by prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | DNA polymerase III, theta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.948 |
CDS57277.1 | yebY | SYMBAF_20129 | SYMBAF_50226 | Putative exonuclease VIII, ds DNA exonuclease encoded by prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.572 |
dnaE | CDS57277.1 | SYMBAF_90016 | SYMBAF_20129 | DNA polymerase III alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Putative exonuclease VIII, ds DNA exonuclease encoded by prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.961 |
dnaE | dnaN | SYMBAF_90016 | SYMBAF_140044 | DNA polymerase III alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.983 |
dnaE | dnaQ | SYMBAF_90016 | SYMBAF_100107 | DNA polymerase III alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Fragment of bifunctional protein (Includes: ribonuclease HI; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.987 |
dnaE | dnaX | SYMBAF_90016 | SYMBAF_90210 | DNA polymerase III alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | DNA polymerase III/DNA elongation factor III, tau and gamma subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.997 |
dnaE | ftn | SYMBAF_90016 | SYMBAF_50224 | DNA polymerase III alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Ferritin iron storage protein (cytoplasmic); Iron-storage protein. | 0.586 |
dnaE | holB | SYMBAF_90016 | SYMBAF_50212 | DNA polymerase III alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | DNA polymerase III, delta prime subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.988 |
dnaE | holD | SYMBAF_90016 | SYMBAF_100176 | DNA polymerase III alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | 0.970 |
dnaE | holE | SYMBAF_90016 | SYMBAF_50223 | DNA polymerase III alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | DNA polymerase III, theta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.957 |
dnaE | rnt | SYMBAF_90016 | SYMBAF_50348 | DNA polymerase III alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Ribonuclease T (RNase T); Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. | 0.971 |
dnaN | CDS57277.1 | SYMBAF_140044 | SYMBAF_20129 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Putative exonuclease VIII, ds DNA exonuclease encoded by prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.987 |
dnaN | dnaE | SYMBAF_140044 | SYMBAF_90016 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.983 |
dnaN | dnaQ | SYMBAF_140044 | SYMBAF_100107 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Fragment of bifunctional protein (Includes: ribonuclease HI; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.997 |