Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EST31513.1 | EST36505.1 | N566_20655 | N566_16180 | uroporphyrin-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Molybdopterin biosynthesis MoeZ; The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.590 |
| EST31513.1 | EST37183.1 | N566_20655 | N566_14395 | uroporphyrin-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.481 |
| EST31513.1 | EST39615.1 | N566_20655 | N566_00960 | uroporphyrin-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Multifunctional uroporphyrinogen III methylase/precorrin-2 oxidase/ferrochelatase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the precorrin methyltransferase family. | 0.998 |
| EST31513.1 | EST39730.1 | N566_20655 | N566_00330 | uroporphyrin-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.671 |
| EST35964.1 | EST36505.1 | N566_16935 | N566_16180 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Molybdopterin biosynthesis MoeZ; The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.976 |
| EST35964.1 | EST37183.1 | N566_16935 | N566_14395 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.559 |
| EST35964.1 | EST39728.1 | N566_16935 | N566_00320 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.764 |
| EST35964.1 | EST39730.1 | N566_16935 | N566_00330 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.761 |
| EST36505.1 | EST31513.1 | N566_16180 | N566_20655 | Molybdopterin biosynthesis MoeZ; The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | uroporphyrin-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.590 |
| EST36505.1 | EST35964.1 | N566_16180 | N566_16935 | Molybdopterin biosynthesis MoeZ; The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.976 |
| EST36505.1 | EST39615.1 | N566_16180 | N566_00960 | Molybdopterin biosynthesis MoeZ; The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Multifunctional uroporphyrinogen III methylase/precorrin-2 oxidase/ferrochelatase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the precorrin methyltransferase family. | 0.670 |
| EST36505.1 | EST39730.1 | N566_16180 | N566_00330 | Molybdopterin biosynthesis MoeZ; The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.622 |
| EST37183.1 | EST31513.1 | N566_14395 | N566_20655 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | uroporphyrin-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.481 |
| EST37183.1 | EST35964.1 | N566_14395 | N566_16935 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.559 |
| EST37183.1 | EST39615.1 | N566_14395 | N566_00960 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Multifunctional uroporphyrinogen III methylase/precorrin-2 oxidase/ferrochelatase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the precorrin methyltransferase family. | 0.658 |
| EST37183.1 | EST39730.1 | N566_14395 | N566_00330 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.673 |
| EST38008.1 | EST39730.1 | N566_09800 | N566_00330 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.547 |
| EST39615.1 | EST31513.1 | N566_00960 | N566_20655 | Multifunctional uroporphyrinogen III methylase/precorrin-2 oxidase/ferrochelatase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the precorrin methyltransferase family. | uroporphyrin-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.998 |
| EST39615.1 | EST36505.1 | N566_00960 | N566_16180 | Multifunctional uroporphyrinogen III methylase/precorrin-2 oxidase/ferrochelatase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the precorrin methyltransferase family. | Molybdopterin biosynthesis MoeZ; The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.670 |
| EST39615.1 | EST37183.1 | N566_00960 | N566_14395 | Multifunctional uroporphyrinogen III methylase/precorrin-2 oxidase/ferrochelatase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the precorrin methyltransferase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.658 |
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