STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EST38848.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (51 aa)    
Predicted Functional Partners:
EST38849.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.857
EST39126.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.773
EST38850.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.737
EST38851.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.737
EST38847.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.715
EST38846.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.597
lgt
Hypothetical protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
     0.560
EST38837.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.544
EST38502.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.430
Your Current Organism:
Streptomycetaceae bacterium MP11305
NCBI taxonomy Id: 1380770
Other names: S. bacterium MP113-05, Streptomycetaceae bacterium MP113-05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.