STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EST24470.1Amine oxidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (528 aa)    
Predicted Functional Partners:
EST31563.1
Acetoin utilization protein AcuC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.993
EST24361.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.969
EST37904.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.967
EST28289.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 
 0.929
EST32076.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.887
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.887
EST37991.1
Guanidinobutyrase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the arginase family.
 
  
 0.876
EST33099.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the aldehyde dehydrogenase family.
    
 0.874
EST36933.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
  0.871
EST38278.1
Glutamate decarboxylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the group II decarboxylase family.
    
 0.812
Your Current Organism:
Streptomycetaceae bacterium MP11305
NCBI taxonomy Id: 1380770
Other names: S. bacterium MP113-05, Streptomycetaceae bacterium MP113-05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.