STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN56484.1Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. (301 aa)    
Predicted Functional Partners:
KRN56035.1
PTS system fructose subfamily transporter subunit IIC.
 
 
 0.992
KRN56187.1
Hypothetical protein.
  
 
 0.962
KRN56188.1
PTS system mannose-specific EIIBCA component family protein.
  
 
 0.962
KRN56191.1
Fructose-6-phosphate aldolase.
   
 
 0.902
KRN56190.1
Phosphotransferase system fructose-specific component IIB.
  
 
 0.892
KRN55564.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
  
  
 
0.891
KRN55860.1
Fructose-1,6-bisphosphate aldolase.
  
 
 0.891
KRN55229.1
Mannose-6-phosphate isomerase, type 1.
    
 0.878
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.878
KRN55092.1
Fbp.
    
 0.874
Your Current Organism:
Atopobium minutum
NCBI taxonomy Id: 1381
Other names: A. minutum, ATCC 33267, Bacteroides minutum, CCUG 31167, DSM 20586, LMG 9439, LMG:9439, Lactobacillus minutum (sic), Lactobacillus minutus, NCFB 2751, NCIMB 702751, VPI 9428
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