rpsT protein (Atopobium minutum) - STRING interaction network

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rpsT

Hypothetical protein; Binds directly to 16S ribosomal RNA. (87 aa)

Predicted Functional Partners:

rplU

0.991

rpsP

0.990

rpsO

0.990

rplM

0.989

rpmA

0.989

rpmB

0.989

rpmE

0.989

rpmF

0.986

rpmH

0.985

rpsF

0.984

Your Current Organism:

Atopobium minutum

NCBI taxonomy Id: 1381
Other names: A. minutum, ATCC 33267, Bacteroides minutum, CCUG 31167, DSM 20586, LMG 9439, LMG:9439, Lactobacillus minutum (sic), Lactobacillus minutus, NCFB 2751, NCIMB 702751, VPI 9428

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	IV72_GL000274	IV72_GL000399	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990
rplM	rpmA	IV72_GL000274	IV72_GL000400	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.993
rplM	rpmB	IV72_GL000274	IV72_GL000614	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family.	0.989
rplM	rpmE	IV72_GL000274	IV72_GL001112	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Binds the 23S rRNA.	0.984
rplM	rpmF	IV72_GL000274	IV72_GL000605	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL32 family.	0.985
rplM	rpmH	IV72_GL000274	IV72_GL001206	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL34 family.	0.978
rplM	rpsF	IV72_GL000274	IV72_GL001180	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.991
rplM	rpsO	IV72_GL000274	IV72_GL000493	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.993
rplM	rpsP	IV72_GL000274	IV72_GL000408	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.991
rplM	rpsT	IV72_GL000274	IV72_GL000507	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Binds directly to 16S ribosomal RNA.	0.989
rplU	rplM	IV72_GL000399	IV72_GL000274	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.990
rplU	rpmA	IV72_GL000399	IV72_GL000400	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplU	rpmB	IV72_GL000399	IV72_GL000614	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family.	0.989
rplU	rpmE	IV72_GL000399	IV72_GL001112	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Hypothetical protein; Binds the 23S rRNA.	0.989
rplU	rpmF	IV72_GL000399	IV72_GL000605	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL32 family.	0.994
rplU	rpmH	IV72_GL000399	IV72_GL001206	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL34 family.	0.988
rplU	rpsF	IV72_GL000399	IV72_GL001180	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.991
rplU	rpsO	IV72_GL000399	IV72_GL000493	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Hypothetical protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.982
rplU	rpsP	IV72_GL000399	IV72_GL000408	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.992
rplU	rpsT	IV72_GL000399	IV72_GL000507	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Hypothetical protein; Binds directly to 16S ribosomal RNA.	0.991

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