Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN55123.1 | KRN55125.1 | IV72_GL000624 | IV72_GL000626 | Glucan-binding domain-containing protein. | Hypothetical protein. | 0.469 |
KRN55123.1 | metK | IV72_GL000624 | IV72_GL000625 | Glucan-binding domain-containing protein. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.469 |
KRN55125.1 | KRN55123.1 | IV72_GL000626 | IV72_GL000624 | Hypothetical protein. | Glucan-binding domain-containing protein. | 0.469 |
KRN55125.1 | KRN55126.1 | IV72_GL000626 | IV72_GL000627 | Hypothetical protein. | YhgE Pip N- domain protein. | 0.607 |
KRN55125.1 | KRN55127.1 | IV72_GL000626 | IV72_GL000628 | Hypothetical protein. | YhgE Pip C-terminal domain-containing protein. | 0.529 |
KRN55125.1 | KRN56076.1 | IV72_GL000626 | IV72_GL000210 | Hypothetical protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.454 |
KRN55125.1 | KRN56131.1 | IV72_GL000626 | IV72_GL000266 | Hypothetical protein. | Hypothetical protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.418 |
KRN55125.1 | coaX | IV72_GL000626 | IV72_GL001113 | Hypothetical protein. | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.405 |
KRN55125.1 | ftsZ | IV72_GL000626 | IV72_GL000651 | Hypothetical protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.499 |
KRN55125.1 | metK | IV72_GL000626 | IV72_GL000625 | Hypothetical protein. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.773 |
KRN55125.1 | pth | IV72_GL000626 | IV72_GL000984 | Hypothetical protein. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.408 |
KRN55126.1 | KRN55125.1 | IV72_GL000627 | IV72_GL000626 | YhgE Pip N- domain protein. | Hypothetical protein. | 0.607 |
KRN55126.1 | KRN55127.1 | IV72_GL000627 | IV72_GL000628 | YhgE Pip N- domain protein. | YhgE Pip C-terminal domain-containing protein. | 0.778 |
KRN55126.1 | metK | IV72_GL000627 | IV72_GL000625 | YhgE Pip N- domain protein. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.542 |
KRN55127.1 | KRN55125.1 | IV72_GL000628 | IV72_GL000626 | YhgE Pip C-terminal domain-containing protein. | Hypothetical protein. | 0.529 |
KRN55127.1 | KRN55126.1 | IV72_GL000628 | IV72_GL000627 | YhgE Pip C-terminal domain-containing protein. | YhgE Pip N- domain protein. | 0.778 |
KRN55127.1 | metK | IV72_GL000628 | IV72_GL000625 | YhgE Pip C-terminal domain-containing protein. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.463 |
KRN56076.1 | KRN55125.1 | IV72_GL000210 | IV72_GL000626 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Hypothetical protein. | 0.454 |
KRN56076.1 | KRN56131.1 | IV72_GL000210 | IV72_GL000266 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Hypothetical protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.892 |
KRN56076.1 | metK | IV72_GL000210 | IV72_GL000625 | Pyruvate kinase; Belongs to the pyruvate kinase family. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.421 |
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