Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN55151.1 | KRN55154.1 | IV72_GL000653 | IV72_GL000656 | Polypeptide-transport-associated domain-containing protein FtsQ-type; Essential cell division protein. | Cell cycle protein; Belongs to the SEDS family. | 0.971 |
KRN55151.1 | KRN55158.1 | IV72_GL000653 | IV72_GL000660 | Polypeptide-transport-associated domain-containing protein FtsQ-type; Essential cell division protein. | Peptidoglycan glycosyltransferase. | 0.964 |
KRN55151.1 | KRN55159.1 | IV72_GL000653 | IV72_GL000661 | Polypeptide-transport-associated domain-containing protein FtsQ-type; Essential cell division protein. | Hypothetical protein. | 0.985 |
KRN55151.1 | KRN55161.1 | IV72_GL000653 | IV72_GL000663 | Polypeptide-transport-associated domain-containing protein FtsQ-type; Essential cell division protein. | Hypothetical protein; Belongs to the MraZ family. | 0.632 |
KRN55151.1 | KRN55701.1 | IV72_GL000653 | IV72_GL001234 | Polypeptide-transport-associated domain-containing protein FtsQ-type; Essential cell division protein. | Peptidoglycan glycosyltransferase; Belongs to the SEDS family. | 0.993 |
KRN55151.1 | KRN55761.1 | IV72_GL000653 | IV72_GL001295 | Polypeptide-transport-associated domain-containing protein FtsQ-type; Essential cell division protein. | Hypothetical protein. | 0.976 |
KRN55151.1 | mraY | IV72_GL000653 | IV72_GL000658 | Polypeptide-transport-associated domain-containing protein FtsQ-type; Essential cell division protein. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.732 |
KRN55151.1 | murD | IV72_GL000653 | IV72_GL000657 | Polypeptide-transport-associated domain-containing protein FtsQ-type; Essential cell division protein. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.910 |
KRN55151.1 | murF | IV72_GL000653 | IV72_GL000659 | Polypeptide-transport-associated domain-containing protein FtsQ-type; Essential cell division protein. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.930 |
KRN55151.1 | rsmH | IV72_GL000653 | IV72_GL000662 | Polypeptide-transport-associated domain-containing protein FtsQ-type; Essential cell division protein. | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.650 |
KRN55154.1 | KRN55151.1 | IV72_GL000656 | IV72_GL000653 | Cell cycle protein; Belongs to the SEDS family. | Polypeptide-transport-associated domain-containing protein FtsQ-type; Essential cell division protein. | 0.971 |
KRN55154.1 | KRN55158.1 | IV72_GL000656 | IV72_GL000660 | Cell cycle protein; Belongs to the SEDS family. | Peptidoglycan glycosyltransferase. | 0.994 |
KRN55154.1 | KRN55159.1 | IV72_GL000656 | IV72_GL000661 | Cell cycle protein; Belongs to the SEDS family. | Hypothetical protein. | 0.912 |
KRN55154.1 | KRN55161.1 | IV72_GL000656 | IV72_GL000663 | Cell cycle protein; Belongs to the SEDS family. | Hypothetical protein; Belongs to the MraZ family. | 0.571 |
KRN55154.1 | KRN55701.1 | IV72_GL000656 | IV72_GL001234 | Cell cycle protein; Belongs to the SEDS family. | Peptidoglycan glycosyltransferase; Belongs to the SEDS family. | 0.830 |
KRN55154.1 | mraY | IV72_GL000656 | IV72_GL000658 | Cell cycle protein; Belongs to the SEDS family. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.961 |
KRN55154.1 | murD | IV72_GL000656 | IV72_GL000657 | Cell cycle protein; Belongs to the SEDS family. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.975 |
KRN55154.1 | murF | IV72_GL000656 | IV72_GL000659 | Cell cycle protein; Belongs to the SEDS family. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.970 |
KRN55154.1 | rsmH | IV72_GL000656 | IV72_GL000662 | Cell cycle protein; Belongs to the SEDS family. | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.710 |
KRN55158.1 | KRN55151.1 | IV72_GL000660 | IV72_GL000653 | Peptidoglycan glycosyltransferase. | Polypeptide-transport-associated domain-containing protein FtsQ-type; Essential cell division protein. | 0.964 |
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