Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN55174.1 | KRN55176.1 | IV72_GL000676 | IV72_GL000678 | Had superfamily (subfamily iiia) phosphatase. | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.775 |
KRN55174.1 | KRN55178.1 | IV72_GL000676 | IV72_GL000680 | Had superfamily (subfamily iiia) phosphatase. | Membrane protein. | 0.734 |
KRN55174.1 | KRN55179.1 | IV72_GL000676 | IV72_GL000681 | Had superfamily (subfamily iiia) phosphatase. | RNA polymerase sigma-F factor; Belongs to the sigma-70 factor family. | 0.722 |
KRN55174.1 | KRN55180.1 | IV72_GL000676 | IV72_GL000682 | Had superfamily (subfamily iiia) phosphatase. | Hypothetical protein. | 0.714 |
KRN55174.1 | alaS | IV72_GL000676 | IV72_GL000679 | Had superfamily (subfamily iiia) phosphatase. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.776 |
KRN55174.1 | aroK | IV72_GL000676 | IV72_GL000384 | Had superfamily (subfamily iiia) phosphatase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.547 |
KRN55174.1 | mltG | IV72_GL000676 | IV72_GL000677 | Had superfamily (subfamily iiia) phosphatase. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.785 |
KRN55176.1 | KRN55174.1 | IV72_GL000678 | IV72_GL000676 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Had superfamily (subfamily iiia) phosphatase. | 0.775 |
KRN55176.1 | KRN55178.1 | IV72_GL000678 | IV72_GL000680 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Membrane protein. | 0.789 |
KRN55176.1 | KRN55179.1 | IV72_GL000678 | IV72_GL000681 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | RNA polymerase sigma-F factor; Belongs to the sigma-70 factor family. | 0.773 |
KRN55176.1 | KRN55180.1 | IV72_GL000678 | IV72_GL000682 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Hypothetical protein. | 0.769 |
KRN55176.1 | alaS | IV72_GL000678 | IV72_GL000679 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.940 |
KRN55176.1 | mltG | IV72_GL000678 | IV72_GL000677 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.824 |
KRN55178.1 | KRN55174.1 | IV72_GL000680 | IV72_GL000676 | Membrane protein. | Had superfamily (subfamily iiia) phosphatase. | 0.734 |
KRN55178.1 | KRN55176.1 | IV72_GL000680 | IV72_GL000678 | Membrane protein. | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.789 |
KRN55178.1 | KRN55179.1 | IV72_GL000680 | IV72_GL000681 | Membrane protein. | RNA polymerase sigma-F factor; Belongs to the sigma-70 factor family. | 0.772 |
KRN55178.1 | KRN55180.1 | IV72_GL000680 | IV72_GL000682 | Membrane protein. | Hypothetical protein. | 0.769 |
KRN55178.1 | alaS | IV72_GL000680 | IV72_GL000679 | Membrane protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.789 |
KRN55178.1 | mltG | IV72_GL000680 | IV72_GL000677 | Membrane protein. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.817 |
KRN55179.1 | KRN55174.1 | IV72_GL000681 | IV72_GL000676 | RNA polymerase sigma-F factor; Belongs to the sigma-70 factor family. | Had superfamily (subfamily iiia) phosphatase. | 0.722 |
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