Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRN55564.11-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. (310 aa)    
Predicted Functional Partners:
KRN56035.1
PTS system fructose subfamily transporter subunit IIC.
  
 
 0.989
KRN55565.1
Sugar isomerase, AgaS family.
    
 0.967
KRN56187.1
Hypothetical protein.
  
 
 0.924
KRN56188.1
PTS system mannose-specific EIIBCA component family protein.
  
 
 0.924
KRN56033.1
Ketose-bisphosphate aldolase.
 
 
 0.910
KRN56190.1
Phosphotransferase system fructose-specific component IIB.
  
 
 0.898
KRN55860.1
Fructose-1,6-bisphosphate aldolase.
  
 
 0.882
KRN55770.1
Ketose-bisphosphate aldolase class-II.
  
 
 0.881
KRN56184.1
Fructose-bisphosphate aldolase.
  
 
 0.880
KRN55092.1
Fbp.
    
 0.862
Your Current Organism:
Atopobium minutum
NCBI taxonomy Id: 1381
Other names: A. minutum, ATCC 33267, Bacteroides minutum, CCUG 31167, DSM 20586, LMG 9439, LMG:9439, Lactobacillus minutum (sic), Lactobacillus minutus, NCFB 2751, NCIMB 702751, VPI 9428
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