STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN55767.1PTS system, IIc component. (464 aa)    
Predicted Functional Partners:
KRN55766.1
PTS system, IIb component.
 
 
 0.994
KRN55771.1
PTS IIA-like nitrogen-regulatory protein PtsN.
 
 
 0.989
KRN56073.1
Hypothetical protein.
 
 
 0.984
KRN55227.1
Hypothetical protein.
    
 0.887
KRN55913.1
Phosphocarrier protein HPr.
    
 0.887
KRN55764.1
Triosephosphate isomerase.
 
     0.797
KRN55765.1
Hypothetical protein.
 
     0.796
KRN55430.1
Short-chain dehydrogenase reductase SDR.
  
 
  0.762
KRN55838.1
Gluconate 5-dehydrogenase.
  
 
  0.762
KRN56158.1
Hypothetical protein.
 
 
 0.725
Your Current Organism:
Atopobium minutum
NCBI taxonomy Id: 1381
Other names: A. minutum, ATCC 33267, Bacteroides minutum, CCUG 31167, DSM 20586, LMG 9439, LMG:9439, Lactobacillus minutum (sic), Lactobacillus minutus, NCFB 2751, NCIMB 702751, VPI 9428
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.