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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY0010Hypothetical protein; Similarity to COG0582 Integrase(Evalue: 6E-23); Belongs to the 'phage' integrase family. (395 aa)    
Predicted Functional Partners:
DSY0069
Hypothetical protein.
  
   
 0.614
DSY1533
Hypothetical protein.
  
     0.607
DSY2654
Hypothetical protein; Similarity to COG1595 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.591
DSY0070
Hypothetical protein.
  
     0.505
DSY0029
Hypothetical protein.
 
  
 0.486
DSY1067
Hypothetical protein; Similarity to COG0577 ABC-type transport systems, involved in lipoprotein release, permease components.
  
     0.479
DSY1707
Hypothetical protein.
  
    0.457
DSY0044
Hypothetical protein; Similarity to COG0270 Site-specific DNA methylase(Evalue: 2E-34); Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
  
 0.448
DSY2529
Hypothetical protein; Similarity to COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism.
  
    0.438
DSY3125
Hypothetical protein.
  
     0.434
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.