STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY0319Hypothetical protein; Similarity to COG0583 Transcriptional regulator(Evalue: 3E-40); Belongs to the LysR transcriptional regulatory family. (329 aa)    
Predicted Functional Partners:
DSY0617
Hypothetical protein; Similarity to COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.773
DSY1115
Hypothetical protein; Similarity to COG0583 Transcriptional regulator(Evalue: 5E-25); Belongs to the LysR transcriptional regulatory family.
  
     0.772
DSY0648
Hypothetical protein; Similarity to COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.765
DSY2621
Hypothetical protein; Similarity to COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.712
DSY0278
Hypothetical protein; Similarity to COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.701
DSY0320
Hypothetical protein; Similarity to COG0388 Predicted amidohydrolase(Evalue: 3E-29).
  
    0.635
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
       0.456
DSY3876
Hypothetical protein; Similarity to COG0583 Transcriptional regulator(Evalue: 1E-40); Belongs to the LysR transcriptional regulatory family.
  
     0.442
DSY0367
Hypothetical protein; Similarity to COG0583 Transcriptional regulator(Evalue: 3E-56); Belongs to the LysR transcriptional regulatory family.
  
     0.429
dsrA
Sulfite reductase dissimilatory-type alpha subunit; Similarity to COG2221 Oxidoreductase related to nitrite reductase(Evalue: 1E-140).
 
     0.423
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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