STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY0508Hypothetical protein; Similarity to COG2206 HD-GYP domain(Evalue: 7E-42). (428 aa)    
Predicted Functional Partners:
DSY0507
Hypothetical protein.
 
     0.828
DSY3815
Hypothetical protein; Similarity to COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain(Evalue: 8E-54).
   
 0.802
DSY0615
Hypothetical protein; Similarity to COG2199 GGDEF domain(Evalue: 2E-22).
 
 
 0.732
DSY0825
Hypothetical protein; Similarity to COG2199 GGDEF domain(Evalue: 6E-23).
 
 
 0.709
DSY2328
Hypothetical protein; Similarity to COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain(Evalue: 1E-31).
 
 
 0.646
DSY0509
Hypothetical protein.
 
     0.629
DSY3384
Hypothetical protein; Similarity to COG2199 GGDEF domain(Evalue: 7E-27).
 
 0.629
DSY3392
Hypothetical protein; Similarity to COG2199 GGDEF domain(Evalue: 3E-31).
 
 0.611
DSY4521
Hypothetical protein; Similarity to COG2199 GGDEF domain(Evalue: 1E-24).
 
 
 0.569
DSY3628
Hypothetical protein; Similarity to COG2199 GGDEF domain(Evalue: 4E-31).
 
 0.561
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.