STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY0555Hypothetical protein; Similarity to COG2199 GGDEF domain(Evalue: 3E-25). (526 aa)    
Predicted Functional Partners:
DSY3403
Similarity to COG2206 HD-GYP domain(Evalue: 7E-37).
 
 
 0.913
DSY3381
Hypothetical protein; Similarity to COG2200 EAL domain(Evalue: 4E-59).
 
 0.912
DSY1020
Hypothetical protein; Similarity to COG1455 Phosphotransferase system cellobiose-specific component IIC(Evalue: 8E-52).
  
 0.823
DSY4122
Hypothetical protein; Similarity to COG2200 EAL domain(Evalue: 3E-40).
 
  
 0.819
DSY1224
Hypothetical protein; Similarity to COG2200 EAL domain(Evalue: 4E-58).
 
0.732
DSY1201
Hypothetical protein; Similarity to COG2200 EAL domain(Evalue: 6E-48).
 
 
0.595
DSY3265
Hypothetical protein; Similarity to COG2202 PAS/PAC domain(Evalue: 2E-28).
 
 
 0.593
DSY4619
Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 2E-31).
     
 0.563
DSY3378
Hypothetical protein; Similarity to COG0642 Signal transduction histidine kinase(Evalue: 1E-61).
 
 0.539
DSY3238
Hypothetical protein; Similarity to COG2206 HD-GYP domain(Evalue: 3E-32).
 
 0.525
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.