STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY0906Hypothetical protein; Similarity to COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism. (512 aa)    
Predicted Functional Partners:
DSY0905
Hypothetical protein; Similarity to COG3279 Response regulator of the LytR/AlgR family.
 
   
 0.944
DSY1257
Hypothetical protein; Similarity to COG0784 CheY-like receiver domain.
 
   
 0.734
DSY0904
Hypothetical protein; Similarity to COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases(Evalue: 8E-28).
       0.705
DSY0907
Similarity to COG0785 Cytochrome c biogenesis protein.
       0.693
DSY2062
Hypothetical protein.
  
   
 0.646
DSY2937
Hypothetical protein.
 
   
 0.631
DSY0903
Similarity to COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits.
 
     0.629
DSY0902
Similarity to COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits.
 
     0.579
DSY1128
Hypothetical protein.
  
   
 0.575
DSY3140
Hypothetical protein; Similarity to COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain(Evalue: 7E-61).
  
 
 0.537
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.