STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY1036Hypothetical protein; Similarity to COG1309 Transcriptional regulator. (136 aa)    
Predicted Functional Partners:
DSY1533
Hypothetical protein.
 
     0.603
DSY1034
Hypothetical protein; Similarity to COG0842 ABC-type multidrug transport system, permease component.
 
     0.581
DSY1033
Hypothetical protein; Similarity to COG0842 ABC-type multidrug transport system, permease component.
       0.509
DSY1035
Hypothetical protein; Similarity to COG1131 ABC-type multidrug transport system, ATPase component(Evalue: 5E-44).
       0.507
DSY1707
Hypothetical protein.
  
     0.494
DSY0069
Hypothetical protein.
  
     0.464
DSY2654
Hypothetical protein; Similarity to COG1595 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.449
DSY0755
Hypothetical protein; Similarity to COG3708 Uncharacterized BCR.
  
     0.417
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.