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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY1069Hypothetical protein; Similarity to COG0515 Serine/threonine protein kinases. (353 aa)    
Predicted Functional Partners:
DSY3950
Hypothetical protein.
 
   0.821
DSY3949
Hypothetical protein; Similarity to COG3299 Uncharacterized homolog of phage Mu protein gp47(Evalue: 8E-60).
 
 
 0.811
DSY2177
Hypothetical protein; Similarity to COG3497 Phage tail sheath protein FI.
 
 
 0.789
DSY3957
Hypothetical protein.
 
 
 0.759
DSY2175
Hypothetical protein.
 
   0.743
DSY3629
Hypothetical protein; Similarity to COG2208 Serine phosphatase RsbU, regulator of sigma subunit.
  
     0.737
DSY1155
Probable chlorophenol reductive dehalogenase; Similarity to COG1388 LysM-repeat proteins and domains.
 
   
 0.700
DSY2828
Hypothetical protein; Similarity to COG0747 ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components(Evalue: 4E-62).
 
     0.680
DSY1958
Hypothetical protein; Similarity to COG2247 Putative cell wall-binding domain(Evalue: 1E-33).
  
     0.667
DSY1103
Hypothetical protein.
  
    0.645
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.