STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY1220Hypothetical protein; Similarity to COG1174 ABC-type proline/glycine betaine transport systems, permease component(Evalue: 1E-70). (279 aa)    
Predicted Functional Partners:
DSY1219
Hypothetical protein; Similarity to COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components(Evalue: 8E-54).
 
 0.999
DSY1221
Hypothetical protein; Similarity to COG1125 ABC-type proline/glycine betaine transport systems, ATPase components(Evalue: 1E-119).
 0.999
DSY1656
Hypothetical protein; Similarity to COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)(Evalue: 8E-49).
 
  
 0.935
DSY1658
Hypothetical protein; Similarity to COG1125 ABC-type proline/glycine betaine transport systems, ATPase components(Evalue: 1E-94).
 
   
 0.504
guaA
Hypothetical protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.450
purN
Hypothetical protein; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
  
 0.449
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.